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\ No newline at end of file diff --git a/.virtual_documents/Files/intro_to_gennaker.ipynb b/.virtual_documents/Files/intro_to_gennaker.ipynb deleted file mode 100644 index 5cbce3d..0000000 --- a/.virtual_documents/Files/intro_to_gennaker.ipynb +++ /dev/null @@ -1,94 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -from symbolic_math import * - - -g = Lambda(x, exp(-x**(-2))) -g - - -h = Lambda(x, a + b*(1-g(x))) -h - - -r = Lambda(x, (a / h(x))) -r - - -F = Lambda((x,t), (exp(h(x)*t)*(1-r(x))+r(x))**(-1)) -F - - - - - -F0 = Lambda(t, limit(F(x,t), x, 0)) -F0 - - - - - - - - -# !uv pip install plotnine polars - - -from plotnine import ggplot, aes, geom_point, geom_smooth - - -from polars import read_csv - - - - - -dtypes = {"x": float, "y": float} - -df = read_csv( - "data.csv", - schema_overrides = dtypes -) - - - - - - -( - ggplot(data=df, mapping = aes(x = "x", y = "y")) - + geom_point() - + geom_smooth(method="lm", color="blue") -) - - - diff --git a/Files/intro_to_gennaker.ipynb b/Files/intro_to_gennaker.ipynb index 17a53b7..85a2e9f 100644 --- a/Files/intro_to_gennaker.ipynb +++ b/Files/intro_to_gennaker.ipynb @@ -1,5 +1,15 @@ { "cells": [ + { + "cell_type": "code", + "execution_count": 1, + "id": "49493b25-32ca-4f4e-a0cf-948e3d957505", + "metadata": {}, + "outputs": [], + "source": [ + "from symbolic_math import *" + ] + }, { "cell_type": "markdown", "id": "e78aac2a-9ecf-4384-8ca8-ad6926f91908", @@ -107,16 +117,6 @@ "You sometimes it is easier to build up complex Latex expressions by composing functions. For example, to specify a time dependent desity function you can define some functions and compose them:" ] }, - { - "cell_type": "code", - "execution_count": 1, - "id": "c024b99c-2c7e-483b-8ff5-026911ae0b01", - "metadata": {}, - "outputs": [], - "source": [ - "from symbolic_math import *" - ] - }, { "cell_type": "code", "execution_count": 2, @@ -194,7 +194,7 @@ }, { "cell_type": "code", - "execution_count": 5, + "execution_count": 12, "id": "03daf02c-7bb5-4119-8f47-56ec7891fe48", "metadata": {}, "outputs": [ @@ -207,13 +207,13 @@ "Lambda((x, t), 1/(alpha/(alpha + beta*(1 - exp(-1/x**2))) + (-alpha/(alpha + beta*(1 - exp(-1/x**2))) + 1)*exp(t*(alpha + beta*(1 - exp(-1/x**2))))))" ] }, - "execution_count": 5, + "execution_count": 12, "metadata": {}, "output_type": "execute_result" } ], "source": [ - "F = Lambda((x,t), (exp(h(x)*t)*(1-r(x))+r(x))**(-1))\n", + "F = Lambda((x, t), (exp(h(x) * t) * (1 - r(x)) + r(x))**(-1))\n", "F" ] }, @@ -246,7 +246,7 @@ } ], "source": [ - "F0 = Lambda(t, limit(F(x,t), x, 0))\n", + "F0 = Lambda(t, limit(F(x, t), x, 0))\n", "F0" ] }, @@ -289,7 +289,7 @@ "metadata": {}, "outputs": [], "source": [ - "from plotnine import ggplot, aes, geom_point, geom_smooth" + "# from plotnine import ggplot, aes, geom_point, geom_smooth" ] }, { @@ -299,7 +299,7 @@ "metadata": {}, "outputs": [], "source": [ - "from polars import read_csv" + "# from polars import read_csv" ] }, { @@ -312,16 +312,16 @@ }, { "cell_type": "code", - "execution_count": 10, + "execution_count": 13, "id": "27d3e23e-f5dc-41d7-aba2-60d6aa791a63", "metadata": {}, "outputs": [], "source": [ - "dtypes = {\"x\": float, \"y\": float}\n", + "dtypes = {\"x\": float, \"y\": float}\n", "\n", "df = read_csv(\n", " \"data.csv\",\n", - " schema_overrides = dtypes\n", + " schema_overrides=dtypes\n", ")\n" ] }, @@ -354,10 +354,10 @@ ], "source": [ "(\n", - " ggplot(data=df, mapping = aes(x = \"x\", y = \"y\"))\n", - " + geom_point() \n", + " ggplot(data=df, mapping=aes(x=\"x\", y=\"y\"))\n", + " + geom_point()\n", " + geom_smooth(method=\"lm\", color=\"blue\")\n", - ") " + ")" ] }, { diff --git a/Files/symbolic_math.py b/Files/symbolic_math.py index 9a240af..f1f78fd 100644 --- a/Files/symbolic_math.py +++ b/Files/symbolic_math.py @@ -1,4 +1,7 @@ +from plotnine import ggplot, aes, geom_point, geom_smooth +from polars import read_csv import mpmath + from sympy import symbols, Function, Lambda, lambdify, exp, diff, limit, oo a, b, x, z, t = symbols('alpha beta x z t') diff --git a/pyproject.toml b/pyproject.toml index 0b261f4..67c82ab 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -10,7 +10,7 @@ dependencies = [ "tomlkit", "jupyterlab-lsp", "python-lsp-server[all]>=1.13.1", - "jupyterlab-spellchecker", + # "jupyterlab-spellchecker", "jupyterlab-code-formatter", "black", "isort", @@ -19,7 +19,7 @@ dependencies = [ "tufte", "clear_run_to_selected", "plotnine", - "sympy", "polars", "pyarrow", + "sympy", ] diff --git a/t.sh b/t.sh index ce89df6..8600493 100755 --- a/t.sh +++ b/t.sh @@ -1,4 +1,8 @@ #!/bin/bash +# +uv lock +uv sync + export JUPYTERLAB_SETTINGS_DIR="${PWD}/.jupyter/lab/user-settings" export JUPYTER_DATA_DIR="${PWD}/.jupyter/data" export JUPYTER_CONFIG_DIR="${PWD}/.jupyter" diff --git a/uv.lock b/uv.lock index b99ae86..dc5bdf4 100644 --- a/uv.lock +++ b/uv.lock @@ -1,5 +1,5 @@ version = 1 -revision = 2 +revision = 3 requires-python = ">=3.13.2" resolution-markers = [ "python_full_version >= '3.14'", @@ -945,19 +945,6 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/54/09/2032e7d15c544a0e3cd831c51d77a8ca57f7555b2e1b2922142eddb02a84/jupyterlab_server-2.27.3-py3-none-any.whl", hash = "sha256:e697488f66c3db49df675158a77b3b017520d772c6e1548c7d9bcc5df7944ee4", size = 59700, upload-time = "2024-07-16T17:02:01.115Z" }, ] -[[package]] -name = "jupyterlab-spellchecker" -version = "0.8.4" -source = { registry = "https://pypi.org/simple" } -dependencies = [ - { name = "jupyter-server" }, - { name = "jupyterlab" }, -] -sdist = { url = "https://files.pythonhosted.org/packages/97/74/7f05f8ee3c9cb47f4f52ea08e5a56cf8e4ed154a39472330435f977db178/jupyterlab_spellchecker-0.8.4.tar.gz", hash = "sha256:e0722f00c795e8b5d60655ed475dd91a67fe7180c32ac891a50f38c7abc7684b", size = 5390753, upload-time = "2023-07-28T20:19:40.629Z" } -wheels = [ - { url = "https://files.pythonhosted.org/packages/08/54/b3d575124fa9404ceef40728f205d033fe52cf417a2245c5d108afe728e8/jupyterlab_spellchecker-0.8.4-py3-none-any.whl", hash = "sha256:2701999d6a826e0a54a12fa41c60b9ffef220ee267e78fe20144423dbcc6d6d8", size = 5328613, upload-time = "2023-07-28T20:19:38.479Z" }, -] - [[package]] name = "jupyterlab-widgets" version = "3.0.15" @@ -1048,7 +1035,6 @@ dependencies = [ { name = "jupyterlab-code-formatter" }, { name = "jupyterlab-lsp" }, { name = "jupyterlab-quickopen" }, - { name = "jupyterlab-spellchecker" }, { name = "plotnine" }, { name = "polars" }, { name = "pyarrow" }, @@ -1069,7 +1055,6 @@ requires-dist = [ { name = "jupyterlab-code-formatter" }, { name = "jupyterlab-lsp" }, { name = "jupyterlab-quickopen" }, - { name = "jupyterlab-spellchecker" }, { name = "plotnine" }, { name = "polars" }, { name = "pyarrow" },