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42 changed files with 40 additions and 463 deletions
4
.gitignore
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|
||||
|
|
@ -1 +0,0 @@
|
|||
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|
||||
|
|
@ -1 +0,0 @@
|
|||
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|
||||
|
|
@ -1 +0,0 @@
|
|||
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|
||||
|
|
@ -1 +0,0 @@
|
|||
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|
||||
|
|
@ -1 +0,0 @@
|
|||
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|
||||
|
|
@ -1 +0,0 @@
|
|||
{"data":{"file-browser-filebrowser:columns":{"sizes":{"name":139.5,"file_size":null,"is_selected":18,"last_modified":86.5}},"layout-restorer:data":{"main":{"dock":{"type":"tab-area","currentIndex":0,"widgets":[]}},"down":{"size":0,"widgets":[]},"left":{"collapsed":false,"visible":true,"current":"filebrowser","widgets":["filebrowser","running-sessions","@jupyterlab/toc:plugin"],"widgetStates":{"jp-running-sessions":{"sizes":[0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666],"expansionStates":[false,false,false,false,false,false]}}},"right":{"collapsed":true,"visible":true,"widgets":["jp-property-inspector"],"widgetStates":{}},"relativeSizes":[0.17370242214532872,0.8262975778546713,0],"top":{"simpleVisibility":true}},"docmanager:recents":{"opened":[],"closed":[]},"file-browser-filebrowser:cwd":{"path":""}},"metadata":{"id":"auto-L"}}
|
||||
|
|
@ -1 +0,0 @@
|
|||
{"data":{"file-browser-filebrowser:columns":{"sizes":{"name":139.5,"file_size":null,"is_selected":18,"last_modified":86.5}},"layout-restorer:data":{"main":{"dock":{"type":"tab-area","currentIndex":0,"widgets":[]}},"down":{"size":0,"widgets":[]},"left":{"collapsed":false,"visible":true,"current":"filebrowser","widgets":["filebrowser","running-sessions","@jupyterlab/toc:plugin"],"widgetStates":{"jp-running-sessions":{"sizes":[0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666],"expansionStates":[false,false,false,false,false,false]}}},"right":{"collapsed":true,"visible":true,"widgets":["jp-property-inspector"],"widgetStates":{}},"relativeSizes":[0.2040650406504065,0.7959349593495935,0],"top":{"simpleVisibility":true}},"docmanager:recents":{"opened":[],"closed":[]}},"metadata":{"id":"auto-Q"}}
|
||||
|
|
@ -1 +0,0 @@
|
|||
{"data":{"file-browser-filebrowser:columns":{"sizes":{"name":139.5,"file_size":null,"is_selected":18,"last_modified":86.5}},"layout-restorer:data":{"main":{"dock":{"type":"tab-area","currentIndex":1,"widgets":["notebook:Files/intro_to_gennaker.ipynb"]},"current":"notebook:Files/intro_to_gennaker.ipynb"},"down":{"size":0,"widgets":[]},"left":{"collapsed":false,"visible":true,"current":"filebrowser","widgets":["filebrowser","running-sessions","@jupyterlab/toc:plugin"],"widgetStates":{"jp-running-sessions":{"sizes":[0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666],"expansionStates":[false,false,false,false,false,false]}}},"right":{"collapsed":true,"visible":true,"widgets":["jp-property-inspector"],"widgetStates":{}},"relativeSizes":[0.2040650406504065,0.7959349593495935,0],"top":{"simpleVisibility":true}},"docmanager:recents":{"opened":[{"path":"Files","contentType":"directory","root":"~/using_uv"},{"path":"Files/intro_to_gennaker.ipynb","contentType":"notebook","factory":"Notebook","root":"~/using_uv"}],"closed":[]},"notebook:Files/intro_to_gennaker.ipynb":{"data":{"path":"Files/intro_to_gennaker.ipynb","factory":"Notebook"}}},"metadata":{"id":"auto-U"}}
|
||||
|
|
@ -1 +0,0 @@
|
|||
{"data":{"file-browser-filebrowser:columns":{"sizes":{"name":155.61328125,"file_size":null,"is_selected":18,"last_modified":91.87109375}},"layout-restorer:data":{"main":{"dock":{"type":"tab-area","currentIndex":0,"widgets":[]}},"down":{"size":0,"widgets":[]},"left":{"collapsed":false,"visible":true,"current":"filebrowser","widgets":["filebrowser","running-sessions","@jupyterlab/toc:plugin"],"widgetStates":{"jp-running-sessions":{"sizes":[0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666],"expansionStates":[false,false,false,false,false,false]}}},"right":{"collapsed":true,"visible":true,"widgets":["jp-property-inspector"],"widgetStates":{}},"relativeSizes":[0.22153574580759047,0.7784642541924095,0],"top":{"simpleVisibility":true}},"docmanager:recents":{"opened":[{"path":"Files","contentType":"directory","root":"~/using_uv"},{"path":"Files/intro_to_gennaker.ipynb","contentType":"notebook","factory":"Notebook","root":"~/using_uv"},{"path":"Files/requirements.txt","contentType":"file","factory":"Editor","root":"~/using_uv"},{"path":"Files/test_imports.ipynb","contentType":"notebook","factory":"Notebook","root":"~/using_uv"},{"path":"","contentType":"directory","root":"~/using_uv"},{"path":"pyproject.toml","contentType":"file","factory":"Editor","root":"~/using_uv"},{"path":"s.sh","contentType":"file","factory":"Editor","root":"~/jl_0"}],"closed":[{"path":"Files/intro_to_gennaker.ipynb","contentType":"notebook","factory":"Notebook","root":"~/using_uv"},{"path":"Files/requirements.txt","contentType":"file","factory":"Editor","root":"~/using_uv"},{"path":"Files/test_imports.ipynb","contentType":"notebook","factory":"Notebook","root":"~/using_uv"},{"path":"pyproject.toml","contentType":"file","factory":"Editor","root":"~/using_uv"},{"path":"s.sh","contentType":"file","factory":"Editor","root":"~/jl_0"}]},"file-browser-filebrowser:cwd":{"path":"Files"}},"metadata":{"id":"default"}}
|
||||
|
|
@ -1,94 +0,0 @@
|
|||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
from symbolic_math import *
|
||||
|
||||
|
||||
g = Lambda(x, exp(-x**(-2)))
|
||||
g
|
||||
|
||||
|
||||
h = Lambda(x, a + b*(1-g(x)))
|
||||
h
|
||||
|
||||
|
||||
r = Lambda(x, (a / h(x)))
|
||||
r
|
||||
|
||||
|
||||
F = Lambda((x,t), (exp(h(x)*t)*(1-r(x))+r(x))**(-1))
|
||||
F
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
F0 = Lambda(t, limit(F(x,t), x, 0))
|
||||
F0
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
# !uv pip install plotnine polars
|
||||
|
||||
|
||||
from plotnine import ggplot, aes, geom_point, geom_smooth
|
||||
|
||||
|
||||
from polars import read_csv
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
dtypes = {"x": float, "y": float}
|
||||
|
||||
df = read_csv(
|
||||
"data.csv",
|
||||
schema_overrides = dtypes
|
||||
)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
(
|
||||
ggplot(data=df, mapping = aes(x = "x", y = "y"))
|
||||
+ geom_point()
|
||||
+ geom_smooth(method="lm", color="blue")
|
||||
)
|
||||
|
||||
|
||||
|
||||
|
|
@ -1,5 +1,15 @@
|
|||
{
|
||||
"cells": [
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 1,
|
||||
"id": "49493b25-32ca-4f4e-a0cf-948e3d957505",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from symbolic_math import *"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"id": "e78aac2a-9ecf-4384-8ca8-ad6926f91908",
|
||||
|
|
@ -107,16 +117,6 @@
|
|||
"You sometimes it is easier to build up complex Latex expressions by composing functions. For example, to specify a time dependent desity function you can define some functions and compose them:"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 1,
|
||||
"id": "c024b99c-2c7e-483b-8ff5-026911ae0b01",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from symbolic_math import *"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 2,
|
||||
|
|
@ -194,7 +194,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 5,
|
||||
"execution_count": 12,
|
||||
"id": "03daf02c-7bb5-4119-8f47-56ec7891fe48",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
|
|
@ -207,13 +207,13 @@
|
|||
"Lambda((x, t), 1/(alpha/(alpha + beta*(1 - exp(-1/x**2))) + (-alpha/(alpha + beta*(1 - exp(-1/x**2))) + 1)*exp(t*(alpha + beta*(1 - exp(-1/x**2))))))"
|
||||
]
|
||||
},
|
||||
"execution_count": 5,
|
||||
"execution_count": 12,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"F = Lambda((x,t), (exp(h(x)*t)*(1-r(x))+r(x))**(-1))\n",
|
||||
"F = Lambda((x, t), (exp(h(x) * t) * (1 - r(x)) + r(x))**(-1))\n",
|
||||
"F"
|
||||
]
|
||||
},
|
||||
|
|
@ -246,7 +246,7 @@
|
|||
}
|
||||
],
|
||||
"source": [
|
||||
"F0 = Lambda(t, limit(F(x,t), x, 0))\n",
|
||||
"F0 = Lambda(t, limit(F(x, t), x, 0))\n",
|
||||
"F0"
|
||||
]
|
||||
},
|
||||
|
|
@ -289,7 +289,7 @@
|
|||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from plotnine import ggplot, aes, geom_point, geom_smooth"
|
||||
"# from plotnine import ggplot, aes, geom_point, geom_smooth"
|
||||
]
|
||||
},
|
||||
{
|
||||
|
|
@ -299,7 +299,7 @@
|
|||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from polars import read_csv"
|
||||
"# from polars import read_csv"
|
||||
]
|
||||
},
|
||||
{
|
||||
|
|
@ -312,16 +312,16 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 10,
|
||||
"execution_count": 13,
|
||||
"id": "27d3e23e-f5dc-41d7-aba2-60d6aa791a63",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"dtypes = {\"x\": float, \"y\": float}\n",
|
||||
"dtypes = {\"x\": float, \"y\": float}\n",
|
||||
"\n",
|
||||
"df = read_csv(\n",
|
||||
" \"data.csv\",\n",
|
||||
" schema_overrides = dtypes\n",
|
||||
" schema_overrides=dtypes\n",
|
||||
")\n"
|
||||
]
|
||||
},
|
||||
|
|
@ -354,10 +354,10 @@
|
|||
],
|
||||
"source": [
|
||||
"(\n",
|
||||
" ggplot(data=df, mapping = aes(x = \"x\", y = \"y\"))\n",
|
||||
" + geom_point() \n",
|
||||
" ggplot(data=df, mapping=aes(x=\"x\", y=\"y\"))\n",
|
||||
" + geom_point()\n",
|
||||
" + geom_smooth(method=\"lm\", color=\"blue\")\n",
|
||||
") "
|
||||
")"
|
||||
]
|
||||
},
|
||||
{
|
||||
|
|
|
|||
|
|
@ -1,4 +1,7 @@
|
|||
from plotnine import ggplot, aes, geom_point, geom_smooth
|
||||
from polars import read_csv
|
||||
import mpmath
|
||||
|
||||
from sympy import symbols, Function, Lambda, lambdify, exp, diff, limit, oo
|
||||
|
||||
a, b, x, z, t = symbols('alpha beta x z t')
|
||||
|
|
|
|||
|
|
@ -10,7 +10,7 @@ dependencies = [
|
|||
"tomlkit",
|
||||
"jupyterlab-lsp",
|
||||
"python-lsp-server[all]>=1.13.1",
|
||||
"jupyterlab-spellchecker",
|
||||
# "jupyterlab-spellchecker",
|
||||
"jupyterlab-code-formatter",
|
||||
"black",
|
||||
"isort",
|
||||
|
|
@ -19,7 +19,7 @@ dependencies = [
|
|||
"tufte",
|
||||
"clear_run_to_selected",
|
||||
"plotnine",
|
||||
"sympy",
|
||||
"polars",
|
||||
"pyarrow",
|
||||
"sympy",
|
||||
]
|
||||
|
|
|
|||
4
t.sh
4
t.sh
|
|
@ -1,4 +1,8 @@
|
|||
#!/bin/bash
|
||||
#
|
||||
uv lock
|
||||
uv sync
|
||||
|
||||
export JUPYTERLAB_SETTINGS_DIR="${PWD}/.jupyter/lab/user-settings"
|
||||
export JUPYTER_DATA_DIR="${PWD}/.jupyter/data"
|
||||
export JUPYTER_CONFIG_DIR="${PWD}/.jupyter"
|
||||
|
|
|
|||
17
uv.lock
17
uv.lock
|
|
@ -1,5 +1,5 @@
|
|||
version = 1
|
||||
revision = 2
|
||||
revision = 3
|
||||
requires-python = ">=3.13.2"
|
||||
resolution-markers = [
|
||||
"python_full_version >= '3.14'",
|
||||
|
|
@ -945,19 +945,6 @@ wheels = [
|
|||
{ url = "https://files.pythonhosted.org/packages/54/09/2032e7d15c544a0e3cd831c51d77a8ca57f7555b2e1b2922142eddb02a84/jupyterlab_server-2.27.3-py3-none-any.whl", hash = "sha256:e697488f66c3db49df675158a77b3b017520d772c6e1548c7d9bcc5df7944ee4", size = 59700, upload-time = "2024-07-16T17:02:01.115Z" },
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "jupyterlab-spellchecker"
|
||||
version = "0.8.4"
|
||||
source = { registry = "https://pypi.org/simple" }
|
||||
dependencies = [
|
||||
{ name = "jupyter-server" },
|
||||
{ name = "jupyterlab" },
|
||||
]
|
||||
sdist = { url = "https://files.pythonhosted.org/packages/97/74/7f05f8ee3c9cb47f4f52ea08e5a56cf8e4ed154a39472330435f977db178/jupyterlab_spellchecker-0.8.4.tar.gz", hash = "sha256:e0722f00c795e8b5d60655ed475dd91a67fe7180c32ac891a50f38c7abc7684b", size = 5390753, upload-time = "2023-07-28T20:19:40.629Z" }
|
||||
wheels = [
|
||||
{ url = "https://files.pythonhosted.org/packages/08/54/b3d575124fa9404ceef40728f205d033fe52cf417a2245c5d108afe728e8/jupyterlab_spellchecker-0.8.4-py3-none-any.whl", hash = "sha256:2701999d6a826e0a54a12fa41c60b9ffef220ee267e78fe20144423dbcc6d6d8", size = 5328613, upload-time = "2023-07-28T20:19:38.479Z" },
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "jupyterlab-widgets"
|
||||
version = "3.0.15"
|
||||
|
|
@ -1048,7 +1035,6 @@ dependencies = [
|
|||
{ name = "jupyterlab-code-formatter" },
|
||||
{ name = "jupyterlab-lsp" },
|
||||
{ name = "jupyterlab-quickopen" },
|
||||
{ name = "jupyterlab-spellchecker" },
|
||||
{ name = "plotnine" },
|
||||
{ name = "polars" },
|
||||
{ name = "pyarrow" },
|
||||
|
|
@ -1069,7 +1055,6 @@ requires-dist = [
|
|||
{ name = "jupyterlab-code-formatter" },
|
||||
{ name = "jupyterlab-lsp" },
|
||||
{ name = "jupyterlab-quickopen" },
|
||||
{ name = "jupyterlab-spellchecker" },
|
||||
{ name = "plotnine" },
|
||||
{ name = "polars" },
|
||||
{ name = "pyarrow" },
|
||||
|
|
|
|||
Loading…
Reference in a new issue